PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000723762
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family NAC
Protein Properties Length: 339aa    MW: 38150.4 Da    PI: 6.8523
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000723762genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM31.84.2e-1033796128
            NAM  96 kgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                    +g+++g+kk+Lv+y   g+++k+ekt+Wvmh+y+l
  MDP0000723762   3 NGKQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 37 
                    67899*********5547999999*********98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100516.626156IPR003441NAC domain
SuperFamilySSF1019411.83E-12356IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    Send to blast
MVNGKQKGCK KILVLYTNFG KNRKPEKTNW VMHQYHLGQH EEEKEGELVV SKIFYQTQPR  60
QCNWSDRASA TTGEGSSDIM ATXSRRDSGS GSCSSKEILP SHPHRDHDQI AATAAAAVAA  120
AAPISSYSGI DIHQLKSDHF SFAPFRKSFD EVGIGGEAST VREGLXSGTC EEIREHHQRS  180
VPVQPHHHHH HHISHELVSD HHEQQQQHEH QQQQQLHHHQ QIATAAAFHI SRPSHPISTI  240
ISPPPLHHTS IILDQDSYSR LMLQNENFQA QQQQQHPHHQ QHHKMGARSA SGLEELIMGC  300
TSSSSDIKEE SSMPNPQEPE WMKYSSFWPD PDNPDHHG*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKF1981140.0KF198114.1 Malus hupehensis NAC domain protein (NAC16) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009352582.10.0PREDICTED: uncharacterized protein LOC103943930 isoform X2
TrEMBLM5W1R31e-165M5W1R3_PRUPE; Uncharacterized protein
STRINGVIT_11s0016g02880.t011e-138(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF45203458
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29230.13e-41NAC domain containing protein 75